| .. |
|
angsd
|
|
|
|
ants
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
aragorn
|
|
|
|
astral
|
|
|
|
bamtools
|
|
|
|
bayescan
|
|
|
|
bcftools
|
bcftools: 1.20 -> 1.21
|
2024-09-13 06:20:40 +00:00 |
|
bedops
|
|
|
|
bedtools
|
|
|
|
bftools
|
|
|
|
bioawk
|
|
|
|
blast
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
bowtie
|
|
|
|
bowtie2
|
|
|
|
bppsuite
|
|
|
|
bwa
|
|
|
|
bwa-mem2
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
cd-hit
|
|
|
|
clustal-omega
|
|
|
|
cmtk
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
conglomerate
|
|
|
|
dcm2niix
|
|
|
|
deeptools
|
|
|
|
delly
|
delly: 1.2.6 -> 1.2.9
|
2024-09-27 00:59:40 +02:00 |
|
diamond
|
|
|
|
dssp
|
|
|
|
ecopcr
|
|
|
|
eggnog-mapper
|
|
|
|
emboss
|
|
|
|
est-sfs
|
|
|
|
exonerate
|
|
|
|
EZminc
|
ezminc: unstable-2019-03-12 -> unstable-2023-10-06
|
2024-09-30 21:02:59 -04:00 |
|
fastp
|
|
|
|
flywheel-cli
|
|
|
|
freebayes
|
|
|
|
gatk
|
|
|
|
genmap
|
|
|
|
hh-suite
|
|
|
|
hisat2
|
|
|
|
hmmer
|
|
|
|
igv
|
|
|
|
inormalize
|
|
|
|
iqtree
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
itsx
|
|
|
|
iv
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
jbrowse
|
jbrowse: 2.15.1 -> 2.15.4
|
2024-09-26 07:44:23 +00:00 |
|
kalign
|
|
|
|
kallisto
|
kallisto: 0.51.0 -> 0.51.1
|
2024-09-17 13:16:27 +00:00 |
|
kent
|
|
|
|
kssd
|
|
|
|
last
|
|
|
|
macs2
|
|
|
|
macse
|
|
|
|
mafft
|
|
|
|
manta
|
|
|
|
megahit
|
|
|
|
meme-suite
|
|
|
|
messer-slim
|
messer-slim: 4.2.2 -> 4.3
|
2024-09-18 08:31:41 -04:00 |
|
migrate
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
minc-tools
|
minc-tools: unstable-2020-07-25 -> 2.3.06-unstable-2023-08-12
|
2024-09-07 13:57:40 -04:00 |
|
minc-widgets
|
|
|
|
minia
|
|
|
|
minimap2
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
mmseqs2
|
|
|
|
mni_autoreg
|
|
|
|
mrbayes
|
|
|
|
mrtrix
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
muscle
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
N3
|
|
|
|
nest
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
neuron
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
niftyreg
|
|
|
|
niftyseg
|
|
|
|
obitools
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
octopus
|
|
|
|
paml
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
picard-tools
|
|
|
|
platypus
|
|
|
|
plink-ng
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
prodigal
|
|
|
|
quast
|
|
|
|
raxml
|
|
|
|
repseek
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
sambamba
|
|
|
|
samblaster
|
|
|
|
samtools
|
|
|
|
seaview
|
|
|
|
seqkit
|
|
|
|
seqtk
|
|
|
|
snpeff
|
|
|
|
somatic-sniper
|
|
|
|
sortmerna
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
stacks
|
|
|
|
star
|
|
|
|
strelka
|
|
|
|
subread
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
sumatools
|
|
|
|
svaba
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
tebreak
|
|
|
|
treemix
|
|
|
|
trf
|
|
|
|
trimal
|
|
|
|
trimmomatic
|
|
|
|
truvari
|
|
|
|
varscan
|
|
|
|
vcftools
|
|
|
|
veryfasttree
|
veryfasttree: 4.0.3 -> 4.0.4
|
2024-09-17 20:29:50 +00:00 |
|
whisper
|
treewide: replace stdenv.is with stdenv.hostPlatform.is
|
2024-09-25 00:04:37 +03:00 |
|
xenomapper
|
|
|
